Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42713.1Hypothetical protein; Pfam:pfam07311 Dodecin. (67 aa)    
Predicted Functional Partners:
AMS39625.1
Hypothetical protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.637
AMS42716.1
Pfam:pfam08002 Protein of unknown function (DUF1697).
 
     0.629
AMS42839.1
Pfam:pfam11450 Protein of unknwon function (DUF3008).
   
    0.590
AMS43137.1
CsbD family protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.589
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Pfam:pfam00793 DAHP synthetase I family; Belongs to the KdsA family.
       0.542
AMS42715.1
Hypothetical protein; Pfam:pfam13468 Glyoxalase-like domain.
       0.542
AMS42712.1
Photosystem reaction center subunit H; Pfam:pfam05239 PRC-barrel domain.
       0.538
AMS40537.1
Hypothetical protein.
   
  
 0.529
AMS42150.1
Hypothetical protein; Pfam:pfam04972 BON domain.
 
    0.528
AMS41303.1
RNA signal recognition particle 4.5S RNA; Pfam:pfam07237 Protein of unknown function (DUF1428).
   
    0.497
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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