Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42718.1ErfK/YbiS/YcfS/YnhG family protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain. (364 aa)    
Predicted Functional Partners:
AMS43742.1
ErfK/YbiS/YcfS/YnhG family protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
 
  
 0.636
AMS40742.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
     0.577
AMS42358.1
Hypothetical protein; Pfam:pfam05128 Domain of unknown function (DUF697).
  
     0.574
AMS39634.1
Hypothetical protein; Pfam:pfam03411 Penicillin-insensitive murein endopeptidase.
  
     0.560
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.499
AMS41471.1
Pfam:pfam01464 Transglycosylase SLT domain.
  
   
 0.494
AMS40631.1
Hypothetical protein.
 
  
 0.465
AMS39824.1
Hypothetical protein; Pfam:pfam08410 Domain of unknown function (DUF1737).
  
     0.444
AMS42719.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.436
AMS41721.1
Pfam:pfam01464 Transglycosylase SLT domain.
  
   
 0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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