Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMS40680.1 | AMS41312.1 | AA2016_1749 | AA2016_2386 | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159). | 0.779 |
AMS40680.1 | AMS41313.1 | AA2016_1749 | AA2016_2387 | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | Pfam:pfam01882 Protein of unknown function DUF58. | 0.778 |
AMS40680.1 | AMS42261.1 | AA2016_1749 | AA2016_3339 | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | Pfam:pfam05036 Sporulation related domain. | 0.403 |
AMS40680.1 | AMS42744.1 | AA2016_1749 | AA2016_3824 | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | ATP-binding protein; Pfam:pfam08904 Domain of unknown function (DUF1849). | 0.754 |
AMS40680.1 | AMS42870.1 | AA2016_1749 | AA2016_3952 | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | Pfam:pfam13116 Protein of unknown function. | 0.632 |
AMS40680.1 | lptD | AA2016_1749 | AA2016_4526 | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.410 |
AMS41312.1 | AMS40680.1 | AA2016_2386 | AA2016_1749 | RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159). | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | 0.779 |
AMS41312.1 | AMS41313.1 | AA2016_2386 | AA2016_2387 | RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159). | Pfam:pfam01882 Protein of unknown function DUF58. | 0.955 |
AMS41312.1 | AMS42744.1 | AA2016_2386 | AA2016_3824 | RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159). | ATP-binding protein; Pfam:pfam08904 Domain of unknown function (DUF1849). | 0.685 |
AMS41312.1 | AMS42870.1 | AA2016_2386 | AA2016_3952 | RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159). | Pfam:pfam13116 Protein of unknown function. | 0.533 |
AMS41313.1 | AMS40680.1 | AA2016_2387 | AA2016_1749 | Pfam:pfam01882 Protein of unknown function DUF58. | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | 0.778 |
AMS41313.1 | AMS41312.1 | AA2016_2387 | AA2016_2386 | Pfam:pfam01882 Protein of unknown function DUF58. | RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159). | 0.955 |
AMS41313.1 | AMS42744.1 | AA2016_2387 | AA2016_3824 | Pfam:pfam01882 Protein of unknown function DUF58. | ATP-binding protein; Pfam:pfam08904 Domain of unknown function (DUF1849). | 0.690 |
AMS41313.1 | AMS42870.1 | AA2016_2387 | AA2016_3952 | Pfam:pfam01882 Protein of unknown function DUF58. | Pfam:pfam13116 Protein of unknown function. | 0.410 |
AMS41726.1 | AMS42261.1 | AA2016_2801 | AA2016_3339 | Hypothetical protein. | Pfam:pfam05036 Sporulation related domain. | 0.661 |
AMS41726.1 | AMS42744.1 | AA2016_2801 | AA2016_3824 | Hypothetical protein. | ATP-binding protein; Pfam:pfam08904 Domain of unknown function (DUF1849). | 0.631 |
AMS41726.1 | AMS42870.1 | AA2016_2801 | AA2016_3952 | Hypothetical protein. | Pfam:pfam13116 Protein of unknown function. | 0.522 |
AMS41726.1 | AMS44204.1 | AA2016_2801 | AA2016_5298 | Hypothetical protein. | Membrane protein. | 0.728 |
AMS41726.1 | lptD | AA2016_2801 | AA2016_4526 | Hypothetical protein. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.503 |
AMS42261.1 | AMS40680.1 | AA2016_3339 | AA2016_1749 | Pfam:pfam05036 Sporulation related domain. | Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175). | 0.403 |
page 1 of 3