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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42753.1Branched-chain amino acid transport. (115 aa)    
Predicted Functional Partners:
AMS42754.1
Pfam:pfam03591 AzlC protein.
 
     0.954
AMS42476.1
Phasin; Pfam:pfam09361 Phasin protein.
 
     0.735
AMS44083.1
Phasin; Pfam:pfam09361 Phasin protein.
 
     0.721
AMS43610.1
Hypothetical protein.
  
     0.712
AMS42715.1
Hypothetical protein; Pfam:pfam13468 Glyoxalase-like domain.
  
     0.702
AMS40668.1
Pfam:pfam09898 Uncharacterized protein conserved in bacteria (DUF2125).
  
     0.665
AMS39079.1
Hypothetical protein.
  
     0.641
AMS40319.1
Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
     0.622
AMS40710.1
Multi antimicrobial extrusion protein MatE; Pfam:pfam13440 Polysaccharide biosynthesis protein.
  
     0.619
AMS42617.1
Malonate transporter; Pfam:pfam03547 Membrane transport protein.
  
     0.598
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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