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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42794.1ABC transporter; Pfam:pfam03886 Protein of unknown function (DUF330). (199 aa)    
Predicted Functional Partners:
AMS42795.1
Organic solvent ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein.
 
   0.937
AMS42796.1
Iron ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
    0.923
AMS42797.1
Toluene ABC transporter permease; Pfam:pfam02405 Permease.
 
  
 0.887
AMS41026.1
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.586
AMS40654.1
Pfam:pfam11306 Protein of unknown function (DUF3108).
  
     0.473
AMS39667.1
SAM-dependent methlyltransferase; Pfam:pfam13847 Methyltransferase domain.
 
     0.453
AMS43553.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.451
AMS42798.1
Pfam:pfam01188 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain.
       0.437
AMS42780.1
Multidrug ABC transporter ATPase; Pfam:pfam07690 Major Facilitator Superfamily.
  
     0.436
AMS43552.1
Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.430
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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