Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS42795.1Organic solvent ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein. (457 aa)    
Predicted Functional Partners:
AMS42796.1
Iron ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 0.999
AMS42797.1
Toluene ABC transporter permease; Pfam:pfam02405 Permease.
 
 0.999
AMS42794.1
ABC transporter; Pfam:pfam03886 Protein of unknown function (DUF330).
 
   0.982
AMS41768.1
Pfam:pfam13502 AsmA-like C-terminal region.
  
   
 0.701
lptD
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.684
AMS42793.1
Kinesin.
  
   
 0.634
AMS42798.1
Pfam:pfam01188 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain.
       0.618
AMS40668.1
Pfam:pfam09898 Uncharacterized protein conserved in bacteria (DUF2125).
  
     0.614
AMS41350.1
Hypothetical protein.
  
     0.612
AMS39726.1
Pfam:pfam07182 Protein of unknown function (DUF1402).
  
     0.608
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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