Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42798.1Pfam:pfam01188 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain. (327 aa)    
Predicted Functional Partners:
AMS42797.1
Toluene ABC transporter permease; Pfam:pfam02405 Permease.
       0.681
AMS42796.1
Iron ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
       0.632
AMS42795.1
Organic solvent ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein.
       0.618
AMS42794.1
ABC transporter; Pfam:pfam03886 Protein of unknown function (DUF330).
       0.447
AMS44391.1
Hypothetical protein; Pfam:pfam00877 NlpC/P60 family.
 
  
 0.427
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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