close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42876.1Pfam:pfam01522 Polysaccharide deacetylase. (313 aa)    
Predicted Functional Partners:
AMS41958.1
Hypothetical protein; Pfam:pfam09347 Domain of unknown function (DUF1989).
     0.679
AMS42877.1
Hypothetical protein; Pfam:pfam01019 Gamma-glutamyltranspeptidase.
       0.458
AMS42875.1
Membrane protein; Pfam:pfam01925 Sulfite exporter TauE/SafE.
       0.451
AMS41632.1
Hypothetical protein.
  
  
 0.450
AMS43069.1
Protein ndvB; Pfam:pfam10091 Putative glucoamylase.
  
  
 0.443
AMS39995.1
Succinoglycan biosynthesis protein exoa; Pfam:pfam00535 Glycosyl transferase family 2.
  
  
 0.421
AMS39996.1
Pfam:pfam00535 Glycosyl transferase family 2.
  
  
 0.403
AMS40715.1
Hypothetical protein.
  
  
 0.403
AMS40716.1
Hypothetical protein.
  
  
 0.403
AMS40824.1
5-hydroxyisourate hydrolase; Pfam:pfam00576 HIUase/Transthyretin family; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
    0.402
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.