Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42895.1Pfam:pfam00701 Dihydrodipicolinate synthetase family; Belongs to the DapA family. (319 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.957
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.940
AMS42375.1
Hypothetical protein; Pfam:pfam05173 Dihydrodipicolinate reductase, C-terminus; Belongs to the DapB family.
 
 
 0.929
AMS42314.1
Pfam:pfam00742 Homoserine dehydrogenase.
 
 
 0.925
nbaC
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.
 
 
   0.893
AMS42896.1
Pfam:pfam00171 Aldehyde dehydrogenase family.
 
  
 0.719
nadX
Putative L-aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
   
 0.649
AMS42897.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
 
    0.583
AMS42893.1
Hypothetical protein; Pfam:pfam13458 Periplasmic binding protein.
 
     0.569
AMS42891.1
ABC transporter substrate-binding protein; Pfam:pfam13458 Periplasmic binding protein.
 
     0.534
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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