STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AMS42930.1CoA-binding protein; Pfam:pfam13380 CoA binding domain. (173 aa)    
Predicted Functional Partners:
AMS42929.1
O-acetylhomoserine aminocarboxypropyltransferase; Pfam:pfam01053 Cys/Met metabolizm PLP-dependent enzyme.
      0.945
AMS42931.1
Glyoxalase; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
       0.648
AMS42932.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
       0.596
fur
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
    0.584
AMS39233.1
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
    0.584
fur_2
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
    0.584
AMS42933.1
Thioesterase; Pfam:pfam03061 Thioesterase superfamily.
 
     0.584
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
      0.534
AMS39506.1
Cystathionine beta-lyase; Pfam:pfam01053 Cys/Met metabolizm PLP-dependent enzyme.
 
      0.523
AMS41037.1
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal; Belongs to the flagella basal body rod proteins family.
    
   0.474
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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