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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42937.1Pfam:pfam03009 Glycerophosphoryl diester phosphodiesterase family. (357 aa)    
Predicted Functional Partners:
AMS42381.1
Pfam:pfam03009 Glycerophosphoryl diester phosphodiesterase family.
  
  
  0.923
AMS40943.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
    
 0.908
AMS43058.1
Glycerol-3-phosphate dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.678
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.567
AMS42938.1
Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
     
 0.509
aqpZ
Porin; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.500
AMS40637.1
MIP family channel protein; Pfam:pfam00230 Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.500
AMS41472.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
  
    0.469
AMS44303.1
Transcriptional regulator, LuxR family; Pfam:pfam12697 Alpha/beta hydrolase family.
 
 
 0.460
AMS41261.1
Hypothetical protein.
  
 
 
 0.456
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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