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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42945.1Exopolysaccharide transporter; Pfam:pfam02706 Chain length determinant protein. (738 aa)    
Predicted Functional Partners:
AMS42948.1
UDP-phosphate glucose phosphotransferase; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.995
AMS42946.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam02563 Polysaccharide biosynthesis/export protein.
 
 
 0.993
AMS39983.1
Hypothetical protein; Pfam:pfam02563 Polysaccharide biosynthesis/export protein.
 
 
 0.977
AMS40790.1
Hypothetical protein; Pfam:pfam14907 Uncharacterized nucleotidyltransferase.
  
 
 0.954
AMS42949.1
Membrane protein.
 
  
 0.920
AMS42947.1
Transferase; Pfam:pfam00534 Glycosyl transferases group 1.
 
  
 0.888
AMS40710.1
Multi antimicrobial extrusion protein MatE; Pfam:pfam13440 Polysaccharide biosynthesis protein.
 
  
 0.877
AMS39984.1
Exopolysaccharide biosynthesis protein; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.850
AMS42944.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
 
   
 0.811
AMS40953.1
Pfam:pfam10082 Uncharacterized protein conserved in bacteria (DUF2320).
 
   
 0.798
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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