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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42960.1Hypothetical protein; Pfam:pfam03981 Ubiquinol-cytochrome C chaperone. (180 aa)    
Predicted Functional Partners:
AMS42959.1
Metal-binding protein; Pfam:pfam02620 Uncharacterized ACR, COG1399.
 
     0.825
AMS39685.1
2-hydroxymuconic semialdehyde hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.692
AMS42961.1
SmpA/OmlA domain-containing protein; Pfam:pfam04355 SmpA / OmlA family.
 
     0.651
plsX
Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
       0.577
AMS42248.1
Pfam:pfam10691 Protein of unknown function (DUF2497).
  
     0.564
fabH
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
       0.526
AMS39832.1
DNA-binding protein; Pfam:pfam04073 Aminoacyl-tRNA editing domain.
  
     0.525
AMS39727.1
DNA-binding protein; Pfam:pfam12844 Helix-turn-helix domain.
  
     0.506
AMS41707.1
ArsR family transcriptional regulator; Pfam:pfam13847 Methyltransferase domain.
  
     0.492
ihfA
Transcriptional regulator; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
       0.435
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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