Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMS39697.1 | AMS39960.1 | AA2016_0759 | AA2016_1022 | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.796 |
| AMS39697.1 | AMS41248.1 | AA2016_0759 | AA2016_2322 | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | Histidine phosphotransferase; Pfam:pfam10090 Uncharacterized protein conserved in bacteria (DUF2328). | 0.449 |
| AMS39697.1 | AMS41771.1 | AA2016_0759 | AA2016_2846 | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | Hypothetical protein; Pfam:pfam04386 Stringent starvation protein B. | 0.717 |
| AMS39697.1 | AMS42959.1 | AA2016_0759 | AA2016_4042 | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | Metal-binding protein; Pfam:pfam02620 Uncharacterized ACR, COG1399. | 0.462 |
| AMS39697.1 | AMS42961.1 | AA2016_0759 | AA2016_4044 | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | SmpA/OmlA domain-containing protein; Pfam:pfam04355 SmpA / OmlA family. | 0.668 |
| AMS39697.1 | atpF | AA2016_0759 | AA2016_4890 | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.619 |
| AMS39697.1 | lptD | AA2016_0759 | AA2016_4526 | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.674 |
| AMS39960.1 | AMS39697.1 | AA2016_1022 | AA2016_0759 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. | 0.796 |
| AMS39960.1 | AMS41248.1 | AA2016_1022 | AA2016_2322 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Histidine phosphotransferase; Pfam:pfam10090 Uncharacterized protein conserved in bacteria (DUF2328). | 0.422 |
| AMS39960.1 | AMS41771.1 | AA2016_1022 | AA2016_2846 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Pfam:pfam04386 Stringent starvation protein B. | 0.592 |
| AMS39960.1 | AMS42961.1 | AA2016_1022 | AA2016_4044 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | SmpA/OmlA domain-containing protein; Pfam:pfam04355 SmpA / OmlA family. | 0.704 |
| AMS39960.1 | atpF | AA2016_1022 | AA2016_4890 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.494 |
| AMS39960.1 | bamA | AA2016_1022 | AA2016_3815 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor yaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.471 |
| AMS39960.1 | bamD | AA2016_1022 | AA2016_2816 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.534 |
| AMS39960.1 | lptD | AA2016_1022 | AA2016_4526 | Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.744 |
| AMS40673.1 | AMS41248.1 | AA2016_1741 | AA2016_2322 | Cell division protein FtsX. | Histidine phosphotransferase; Pfam:pfam10090 Uncharacterized protein conserved in bacteria (DUF2328). | 0.745 |
| AMS40673.1 | AMS42959.1 | AA2016_1741 | AA2016_4042 | Cell division protein FtsX. | Metal-binding protein; Pfam:pfam02620 Uncharacterized ACR, COG1399. | 0.447 |
| AMS40673.1 | AMS42961.1 | AA2016_1741 | AA2016_4044 | Cell division protein FtsX. | SmpA/OmlA domain-containing protein; Pfam:pfam04355 SmpA / OmlA family. | 0.720 |
| AMS40673.1 | atpF | AA2016_1741 | AA2016_4890 | Cell division protein FtsX. | F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.461 |
| AMS40673.1 | lptD | AA2016_1741 | AA2016_4526 | Cell division protein FtsX. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.688 |
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