Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42968.1ABC transporter permease; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. (302 aa)    
Predicted Functional Partners:
AMS42965.1
ABC transporter; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.999
AMS42967.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.999
AMS42966.1
Amino acid ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.998
proW_2
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.824
AMS43324.1
Membrane protein.
  
    0.778
AMS41299.1
Pfam:pfam00005 ABC transporter.
 
 
 0.597
AMS40753.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 
 0.543
ribH-2
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
       0.468
AMS42969.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
     
 0.464
AMS43647.1
ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
 0.463
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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