Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42978.1MarR family transcriptional regulator; Pfam:pfam13463 Winged helix DNA-binding domain. (171 aa)    
Predicted Functional Partners:
AMS44143.1
Pfam:pfam11164 Protein of unknown function (DUF2948).
  
     0.661
AMS42982.1
Membrane protein; Pfam:pfam06271 RDD family.
 
    0.616
fur
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.594
AMS41030.1
Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
  
  
 0.586
AMS42979.1
Putative membrane protein.
     
 0.584
AMS41011.1
Hypothetical protein; Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal.
  
    0.580
AMS39863.1
Signal peptide protein.
 
     0.572
AMS42977.1
Amidase; Pfam:pfam01471 Putative peptidoglycan binding domain.
 
   
 0.572
AMS42782.1
Diguanylate cyclase; Pfam:pfam00990 GGDEF domain.
 
  
 0.571
AMS42214.1
Hypothetical protein; Pfam:pfam07310 PAS domain.
  
    0.570
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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