Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AMS42982.1Membrane protein; Pfam:pfam06271 RDD family. (156 aa)    
Predicted Functional Partners:
AMS39687.1
Pfam:pfam11014 Protein of unknown function (DUF2852).
 
    0.702
AMS44204.1
Membrane protein.
  
     0.694
AMS43729.1
Hypothetical protein.
  
     0.691
AMS40297.1
RNA-binding protein S4; Pfam:pfam01479 S4 domain.
  
    0.686
AMS41726.1
Hypothetical protein.
  
     0.669
AMS42981.1
Pfam:pfam00490 Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
     
 0.663
AMS42363.1
Hypothetical protein.
 
   
 0.653
AMS39190.1
Hypothetical protein.
  
     0.651
AMS39662.1
Transglutaminase; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP.
  
   
 0.648
AMS42212.1
Putative periplasmic protein; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP.
  
   
 0.648
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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