Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42998.1Putative membrane protein; Pfam:pfam03706 Uncharacterized protein family (UPF0104). (314 aa)    
Predicted Functional Partners:
AMS44137.1
Hypothetical protein; Pfam:pfam03372 Endonuclease/Exonuclease/phosphatase family.
 
  
 0.587
AMS40843.1
Hypothetical protein.
 
     0.542
AMS41322.1
Hypothetical protein.
  
     0.487
AMS40234.1
Hypothetical protein; Pfam:pfam03372 Endonuclease/Exonuclease/phosphatase family.
  
  
 0.485
AMS42997.1
Exopolyphosphatase; Pfam:pfam02541 Ppx/GppA phosphatase family.
       0.437
AMS40739.1
Hypothetical protein; Pfam:pfam13763 Domain of unknown function (DUF4167).
  
     0.414
rlmE
23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
       0.410
AMS40615.1
Pfam:pfam08543 Phosphomethylpyrimidine kinase.
  
    0.401
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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