STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS43017.1Lipoprotein; Pfam:pfam02608 Basic membrane protein. (339 aa)    
Predicted Functional Partners:
AMS43015.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.896
AMS43014.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.888
AMS42611.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.817
AMS40603.1
ABC transporter, permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.815
AMS44321.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.813
AMS44322.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.807
AMS42612.1
Sugar ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.806
AMS40604.1
Sugar ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.805
AMS43004.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.792
AMS43003.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.765
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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