STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43020.1Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (344 aa)    
Predicted Functional Partners:
AMS40312.1
Hypothetical protein.
  
     0.773
AMS39181.1
Pfam:pfam06620 Protein of unknown function (DUF1150).
  
     0.769
AMS42979.1
Putative membrane protein.
  
     0.769
AMS39890.1
Membrane protein; Pfam:pfam02974 Protease inhibitor Inh.
  
   
 0.763
AMS43587.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.758
AMS42069.1
Pfam:pfam09832 Uncharacterized protein conserved in bacteria (DUF2059).
  
     0.755
AMS40486.1
Hypothetical protein; Pfam:pfam13747 Domain of unknown function (DUF4164).
  
     0.754
AMS42326.1
Hypothetical protein.
  
     0.731
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.718
AMS40518.1
25 kDa outer-membrane immunogenic protein; Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
 
 0.715
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.