Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43050.1Pfam:pfam00480 ROK family. (404 aa)    
Predicted Functional Partners:
AMS43051.1
ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
 
  
 0.744
AMS43567.1
Peroxidase; Pfam:pfam00578 AhpC/TSA family.
  
    0.675
fur
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.634
AMS39233.1
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.634
fur_2
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
  
 0.634
AMS43055.1
Sugar kinase, ribokinase; Pfam:pfam00294 pfkB family carbohydrate kinase.
 
  
 0.628
AMS39158.1
Hypothetical protein; Pfam:pfam00480 ROK family.
 
     0.622
AMS43054.1
Aminotransferase; Pfam:pfam01380 SIS domain.
 
     0.615
AMS42660.1
Hypothetical protein; Pfam:pfam00480 ROK family.
 
     0.569
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.472
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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