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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43055.1Sugar kinase, ribokinase; Pfam:pfam00294 pfkB family carbohydrate kinase. (309 aa)    
Predicted Functional Partners:
AMS43054.1
Aminotransferase; Pfam:pfam01380 SIS domain.
 
  
 0.944
AMS43053.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
    0.851
AMS43052.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
    0.833
AMS43051.1
ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
 
    0.796
AMS43056.1
Sugar ABC transporter, ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
  
  
 0.789
AMS43050.1
Pfam:pfam00480 ROK family.
 
  
 0.635
AMS41078.1
5-deoxyglucuronate isomerase; Pfam:pfam04962 KduI/IolB family.
  
  
 0.546
AMS39433.1
Dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.518
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Pfam:pfam00977 Histidine biosynthesis protein.
  
    0.512
AMS41075.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family.
  
  
 0.497
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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