STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43059.1Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily. (360 aa)    
Predicted Functional Partners:
AMS43061.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.994
AMS43062.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.994
AMS43064.1
ABC-type sugar transport system, periplasmic component.
 
 0.988
AMS43060.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
 
  
 
0.967
AMS43063.1
Membrane protein; Pfam:pfam09928 Predicted small integral membrane protein (DUF2160).
 
    0.946
AMS43058.1
Glycerol-3-phosphate dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.750
AMS39533.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.554
AMS42662.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.553
AMS42297.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.549
AMS39149.1
Mannitol ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.548
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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