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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadACMP deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (150 aa)    
Predicted Functional Partners:
AMS43118.1
DNA methyltransferase; Pfam:pfam03602 Conserved hypothetical protein 95.
 
    0.721
hisE
Pfam:pfam01503 Phosphoribosyl-ATP pyrophosphohydrolase.
   
  
 0.592
AMS43119.1
Hypothetical protein; Pfam:pfam00849 RNA pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.
     
 0.592
ybeZ
Putative enzyme with nucleoside triphosphate hydrolase domain; Pfam:pfam02562 PhoH-like protein.
 
     0.585
AMS38988.1
Peptidase M22; Pfam:pfam00814 Glycoprotease family.
 
  
 0.571
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
  
 0.561
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.521
AMS40286.1
Farnesyl-diphosphate synthase; Pfam:pfam00348 Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
  
 0.515
ddl
Hypothetical protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
    0.505
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
 
  
 0.494
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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