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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43126.1HAD family hydrolase; Pfam:pfam13344 Haloacid dehalogenase-like hydrolase. (286 aa)    
Predicted Functional Partners:
AMS43125.1
Riboflavin kinase; Pfam:pfam06574 FAD synthetase; Belongs to the ribF family.
  
    0.813
AMS43491.1
Hydrolase; Pfam:pfam13023 HD domain.
 
  
 0.755
AMS38979.1
Cro/Cl family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix.
 
     0.665
hisS
Pfam:pfam13393 Histidyl-tRNA synthetase.
 
    0.662
AMS40658.1
Pfam:pfam08241 Methyltransferase domain.
 
     0.605
AMS44209.1
2-deoxycytidine 5-triphosphate deaminase; Pfam:pfam06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD).
 
    0.603
AMS41362.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
   0.574
AMS40194.1
Pfam:pfam07896 Protein of unknown function (DUF1674).
  
     0.517
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
 
     0.499
AMS43790.1
Hypothetical protein; Pfam:pfam05175 Methyltransferase small domain; Belongs to the methyltransferase superfamily.
 
     0.482
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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