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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43129.1Membrane protein; Pfam:pfam00529 HlyD family secretion protein. (380 aa)    
Predicted Functional Partners:
AMS43128.1
DSBA oxidoreductase; Pfam:pfam07690 Major Facilitator Superfamily.
 
 
 0.937
AMS43130.1
Pfam:pfam01047 MarR family.
 
  
 0.889
AMS42247.1
Transporter; Pfam:pfam02321 Outer membrane efflux protein.
 
 
 0.797
AMS42995.1
Pfam:pfam07690 Major Facilitator Superfamily.
 
 
 0.671
AMS43246.1
Pfam:pfam00529 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.631
AMS39134.1
ABC-type bacteriocin/lantibiotic exporter; Pfam:pfam00005 ABC transporter.
  
 
 0.626
AMS44151.1
ABC transporter permease protein; Pfam:pfam12704 MacB-like periplasmic core domain.
 
  
 0.615
AMS43843.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
 
 
 0.611
AMS41821.1
Multidrug ABC transporter substrate-binding protein; Pfam:pfam12704 MacB-like periplasmic core domain.
 
  
 0.608
AMS43245.1
RND multidrug efflux transporter MexF; Pfam:pfam00873 AcrB/AcrD/AcrF family.
 
   
 0.591
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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