Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43139.1NIPSNAP family containing protein; Pfam:pfam07978 NIPSNAP. (251 aa)    
Predicted Functional Partners:
AMS42016.1
Abortive infection protein.
  
     0.762
AMS38992.1
Hypothetical protein.
     0.751
AMS42061.1
Hypothetical protein; Pfam:pfam14399 NlpC/p60-like transpeptidase.
  
     0.748
AMS38993.1
Hypothetical protein; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain.
  
   
 0.648
AMS43138.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
     0.613
AMS40704.1
Hypothetical protein.
  
     0.608
AMS40743.1
Pfam:pfam01636 Phosphotransferase enzyme family.
  
     0.541
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.532
AMS42114.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Pfam:pfam12681 Glyoxalase-like domain.
 
    0.522
AMS44072.1
Transcriptional regulator, AraC family; Pfam:pfam12833 Helix-turn-helix domain.
  
     0.519
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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