STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43169.1Pfam:pfam13505 Outer membrane protein beta-barrel domain. (241 aa)    
Predicted Functional Partners:
AMS39181.1
Pfam:pfam06620 Protein of unknown function (DUF1150).
  
     0.710
AMS43749.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
 
     0.644
AMS42326.1
Hypothetical protein.
  
     0.622
AMS42377.1
Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
     0.590
AMS43020.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.584
AMS43147.1
Hypothetical protein; Pfam:pfam10276 Zinc-finger domain.
  
     0.564
AMS39768.1
Pfam:pfam04241 Protein of unknown function (DUF423).
  
     0.542
AMS44204.1
Membrane protein.
  
     0.536
AMS39190.1
Hypothetical protein.
  
     0.533
AMS43486.1
Pfam:pfam09539 Protein of unknown function (DUF2385).
  
     0.531
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.