Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43238.1ABC transporter permease; Pfam:pfam13437 HlyD family secretion protein. (406 aa)    
Predicted Functional Partners:
AMS43237.1
Putative ABC transport system, membrane protein; Pfam:pfam02687 FtsX-like permease family.
 
   
 0.957
AMS43236.1
ABC-type antimicrobial peptide transport system, ATPase component; Pfam:pfam00005 ABC transporter.
 
  
 0.918
AMS42247.1
Transporter; Pfam:pfam02321 Outer membrane efflux protein.
  
 
 0.798
AMS39134.1
ABC-type bacteriocin/lantibiotic exporter; Pfam:pfam00005 ABC transporter.
  
 
 0.671
AMS44151.1
ABC transporter permease protein; Pfam:pfam12704 MacB-like periplasmic core domain.
 
  
 0.629
AMS41821.1
Multidrug ABC transporter substrate-binding protein; Pfam:pfam12704 MacB-like periplasmic core domain.
 
  
 0.619
AMS42995.1
Pfam:pfam07690 Major Facilitator Superfamily.
  
 
 0.539
AMS43128.1
DSBA oxidoreductase; Pfam:pfam07690 Major Facilitator Superfamily.
  
 
 0.539
AMS43843.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
  
 
 0.539
AMS39029.1
Pfam:pfam13437 HlyD family secretion protein.
 
     0.424
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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