STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS43246.1Pfam:pfam00529 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (382 aa)    
Predicted Functional Partners:
AMS43245.1
RND multidrug efflux transporter MexF; Pfam:pfam00873 AcrB/AcrD/AcrF family.
 0.992
AMS42247.1
Transporter; Pfam:pfam02321 Outer membrane efflux protein.
 
 0.966
AMS43713.1
Acriflavine resistance protein B; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.953
AMS39295.1
Efflux transporter, RND family, MFP subunit; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.923
AMS39294.1
ABC transporter permease; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.921
AMS40891.1
Multidrug transporter AcrB; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.921
AMS43714.1
RND transporter MFP subunit; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.915
AMS40892.1
Transporter, putative; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.913
AMS42168.1
Membrane protein; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.913
AMS42169.1
Multidrug transporter AcrB; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.873
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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