Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AMS43274.1Pfam:pfam12532 Protein of unknown function (DUF3732). (683 aa)    
Predicted Functional Partners:
AMS43272.1
Hypothetical protein.
 
 
 
 0.984
AMS40673.1
Cell division protein FtsX.
   
 
 0.810
ftsE
Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 
 0.785
AMS43273.1
Hypothetical protein.
       0.773
AMS39956.1
Hypothetical protein; Pfam:pfam03567 Sulfotransferase family.
  
 
 0.667
AMS42291.1
Hypothetical protein; Pfam:pfam06347 Bacterial SH3 domain.
  
 
 0.589
AMS42386.1
Cell wall hydrolase; Pfam:pfam01520 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.589
AMS43787.1
Tetratricopeptide TPR_1 repeat-containing protein; Pfam:pfam13414 TPR repeat.
   
   0.545
AMS42232.1
Peptidase; Pfam:pfam01435 Peptidase family M48.
   
   0.468
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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