STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AMS43282.1Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle. (528 aa)    
Predicted Functional Partners:
AMS43280.1
Permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  0.988
AMS43283.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
 
     0.917
AMS43281.1
Peptide permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   0.848
AMS43276.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.795
AMS40599.1
Bicyclomycin resistance protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
  
 
  0.688
AMS40011.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   0.667
AMS44260.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   0.664
AMS39599.1
ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
  0.646
AMS44259.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   0.642
AMS43279.1
Glucose dehydrogenase; Pfam:pfam00701 Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
     0.636
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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