STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43353.1N-acetylmuramoyl-L-alanine amidase AmiC; Pfam:pfam13433 Periplasmic binding protein domain. (368 aa)    
Predicted Functional Partners:
AMS43354.1
Transcriptional antiterminator; Pfam:pfam03861 ANTAR domain.
 
 
 0.979
AMS43357.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
 0.888
AMS43355.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.883
AMS43358.1
Acetamidase; Pfam:pfam03069 Acetamidase/Formamidase family.
 
     0.876
AMS43356.1
Glutathione ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.873
AMS43344.1
Two component response regulator; Pfam:pfam03861 ANTAR domain.
 
 
 0.829
AMS42581.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.793
AMS42605.1
Hypothetical protein; Pfam:pfam00005 ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.785
AMS43359.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.610
AMS42889.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.605
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.