STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43355.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (301 aa)    
Predicted Functional Partners:
AMS43357.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  0.992
AMS43356.1
Glutathione ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    0.960
AMS43354.1
Transcriptional antiterminator; Pfam:pfam03861 ANTAR domain.
 
     0.923
AMS43353.1
N-acetylmuramoyl-L-alanine amidase AmiC; Pfam:pfam13433 Periplasmic binding protein domain.
 
     0.884
AMS43281.1
Peptide permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    0.816
AMS43358.1
Acetamidase; Pfam:pfam03069 Acetamidase/Formamidase family.
 
     0.815
AMS43199.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    0.813
AMS43839.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    0.813
AMS41616.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    0.810
AMS39281.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    0.807
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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