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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43373.1Pfam:pfam01545 Cation efflux family. (298 aa)    
Predicted Functional Partners:
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
  
  
 0.624
AMS41267.1
Putative metal cation transporter; Pfam:pfam02535 ZIP Zinc transporter.
   
 0.581
AMS39484.1
Copper-transporting P-type ATPase; Pfam:pfam00122 E1-E2 ATPase.
 
  
 0.535
AMS43372.1
Hypothetical protein.
       0.520
AMS43374.1
Hypothetical protein.
       0.501
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.497
AMS43288.1
Cysteine desulfurase; Pfam:pfam12796 Ankyrin repeats (3 copies).
 
 0.465
AMS41802.1
Ankyrin; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
 0.445
AMS42146.1
Hypothetical protein; Pfam:pfam00122 E1-E2 ATPase.
    
 0.439
AMS39751.1
Heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting; Pfam:pfam00122 E1-E2 ATPase.
 
  
 0.438
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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