Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43408.1Hypothetical protein; Pfam:pfam03724 META domain. (255 aa)    
Predicted Functional Partners:
AMS43471.1
Peptigoglycan-binding protein LysM; Pfam:pfam01476 LysM domain.
  
    0.711
AMS40879.1
Pfam:pfam03358 NADPH-dependent FMN reductase.
   
  
 0.691
wrbA_2
NAD(P)H quinone oxidoreductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
   
  
 0.691
AMS39711.1
Peptidoglycan-binding protein LysM; Pfam:pfam01476 LysM domain.
   
    0.652
AMS42247.1
Transporter; Pfam:pfam02321 Outer membrane efflux protein.
   
   0.652
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.583
AMS43409.1
Molybdenum cofactor biosynthesis protein MoaE; Pfam:pfam02391 MoaE protein.
       0.569
AMS43410.1
Molybdenum cofactor biosynthesis protein MoaD; Pfam:pfam02597 ThiS family.
       0.569
AMS39950.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
  
  
 0.562
AMS42150.1
Hypothetical protein; Pfam:pfam04972 BON domain.
   
  
 0.532
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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