STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43408.1Hypothetical protein; Pfam:pfam03724 META domain. (255 aa)    
Predicted Functional Partners:
AMS43471.1
Peptigoglycan-binding protein LysM; Pfam:pfam01476 LysM domain.
 
    0.720
AMS40879.1
Pfam:pfam03358 NADPH-dependent FMN reductase.
  
  
 0.683
wrbA_2
NAD(P)H quinone oxidoreductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
  
  
 0.683
AMS39711.1
Peptidoglycan-binding protein LysM; Pfam:pfam01476 LysM domain.
  
    0.663
AMS43410.1
Molybdenum cofactor biosynthesis protein MoaD; Pfam:pfam02597 ThiS family.
       0.575
AMS43409.1
Molybdenum cofactor biosynthesis protein MoaE; Pfam:pfam02391 MoaE protein.
       0.566
AMS39950.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
  
  
 0.554
AMS43411.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Pfam:pfam01066 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.544
AMS42307.1
Nitrate ABC transporter substrate-binding protein; Pfam:pfam09084 NMT1/THI5 like.
  
     0.522
AMS42150.1
Hypothetical protein; Pfam:pfam04972 BON domain.
   
  
 0.511
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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