Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS43469.1Pfam:pfam00005 ABC transporter. (632 aa)    
Predicted Functional Partners:
AMS43470.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
       0.818
AMS43471.1
Peptigoglycan-binding protein LysM; Pfam:pfam01476 LysM domain.
       0.649
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.644
psd
Phosphatidylserine decarboxylase subunit beta; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.608
AMS43467.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Pfam:pfam01066 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.599
AMS40724.1
Hypothetical protein.
  
     0.598
AMS41749.1
Photosynthetic protein synthase I; Pfam:pfam02630 SCO1/SenC.
  
     0.577
AMS40362.1
Pfam:pfam00005 ABC transporter.
  
 
0.528
AMS43472.1
Pfam:pfam03641 Possible lysine decarboxylase; Belongs to the LOG family.
       0.528
AMS41331.1
ATP-binding cassette sub-family B member 6, mitochondrial-like; Pfam:pfam00005 ABC transporter.
  
 
0.526
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.