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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43480.1Pfam:pfam04480 Protein of unknown function (DUF559). (129 aa)    
Predicted Functional Partners:
AMS43479.1
Putative lactoylglutathione lyase protein; Pfam:pfam12681 Glyoxalase-like domain.
       0.781
AMS43476.1
Aldehyde-activating protein; Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme.
       0.703
AMS43478.1
Aldehyde-activating protein; Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme.
       0.703
AMS43477.1
Hypothetical protein; Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme.
       0.696
AMS43475.1
Proline iminopeptidase; Pfam:pfam00561 alpha/beta hydrolase fold; Belongs to the peptidase S33 family.
       0.690
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
    0.656
cysS
Pfam:pfam01406 tRNA synthetases class I (C) catalytic domain; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.444
AMS43474.1
2-isopropylmalate synthase; Pfam:pfam00682 HMGL-like; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.431
AMS43342.1
Putative endonuclease containing a URI domain; Pfam:pfam01541 GIY-YIG catalytic domain.
  
     0.412
AMS43349.1
Putative endonuclease containing a URI domain; Pfam:pfam01541 GIY-YIG catalytic domain.
  
     0.412
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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