STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43495.1Pfam:pfam11746 Protein of unknown function (DUF3303). (90 aa)    
Predicted Functional Partners:
AMS43496.1
Oxidoreductase, short chain dehydrogenase/reductase family; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
       0.597
AMS43497.1
ATPase; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
       0.588
AMS43498.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
       0.588
AMS43494.1
Pfam:pfam13316 Protein of unknown function (DUF4087).
       0.531
AMS43499.1
Carboxylate--amine ligase; Pfam:pfam14401 RimK-like ATPgrasp N-terminal domain.
       0.463
AMS43500.1
N-acetyltransferase GCN5; Pfam:pfam11814 Peptidase_C39 like family.
       0.459
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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