STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43499.1Carboxylate--amine ligase; Pfam:pfam14401 RimK-like ATPgrasp N-terminal domain. (486 aa)    
Predicted Functional Partners:
AMS43500.1
N-acetyltransferase GCN5; Pfam:pfam11814 Peptidase_C39 like family.
     0.953
AMS43496.1
Oxidoreductase, short chain dehydrogenase/reductase family; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
    0.610
AMS43498.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
       0.593
AMS43497.1
ATPase; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
       0.592
AMS43495.1
Pfam:pfam11746 Protein of unknown function (DUF3303).
       0.463
AMS40361.1
Nitroreductase; Pfam:pfam00881 Nitroreductase family.
  
  
 0.452
AMS41391.1
Hypothetical protein; Pfam:pfam00999 Sodium/hydrogen exchanger family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.442
AMS42355.1
Potassium transporter; Pfam:pfam00999 Sodium/hydrogen exchanger family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.442
AMS44005.1
Hypothetical protein; Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family.
 
     0.406
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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