Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AMS43508.1Pfam:pfam10101 Predicted membrane protein (DUF2339). (912 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.700
AMS43509.1
Aromatic compound catabolic protein; Pfam:pfam03061 Thioesterase superfamily.
       0.693
AMS42210.1
Hypothetical protein.
  
     0.688
AMS42944.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
  
     0.648
AMS41791.1
ATPase; Pfam:pfam01935 Domain of unknown function DUF87.
  
     0.539
AMS41373.1
Hypothetical protein.
  
    0.524
AMS41040.1
Pfam:pfam01052 Surface presentation of antigens (SPOA).
  
     0.502
AMS43511.1
Hypothetical protein; Pfam:pfam07690 Major Facilitator Superfamily.
       0.502
AMS42949.1
Membrane protein.
  
     0.481
AMS44399.1
Pfam:pfam09476 Pilus biogenesis CpaD protein (pilus_cpaD).
  
     0.478
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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