STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43516.1Nickel-resistant pritein NirB; Pfam:pfam02583 Metal-sensitive transcriptional repressor. (93 aa)    
Predicted Functional Partners:
AMS43515.1
Pfam:pfam07690 Major Facilitator Superfamily.
 
  
 0.814
AMS40614.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.739
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
  
  
 0.730
AMS40612.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
 0.703
AMS42345.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
  
  
 0.703
AMS39878.1
Hypothetical protein; Pfam:pfam04234 CopC domain.
     
 0.521
AMS43936.1
Copper binding protein; Pfam:pfam04234 CopC domain.
     
 0.521
AMS40583.1
Hypothetical protein; Pfam:pfam00403 Heavy-metal-associated domain.
 
  
 0.497
AMS43517.1
Pfam:pfam00106 short chain dehydrogenase.
       0.447
AMS39462.1
Malic enzyme; Pfam:pfam01515 Phosphate acetyl/butaryl transferase.
     
 0.412
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.