Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43516.1Nickel-resistant pritein NirB; Pfam:pfam02583 Metal-sensitive transcriptional repressor. (93 aa)    
Predicted Functional Partners:
AMS43515.1
Pfam:pfam07690 Major Facilitator Superfamily.
 
  
 0.815
AMS40614.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.785
AMS40612.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
 0.729
AMS42345.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
  
  
 0.729
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
  
  
 0.630
AMS39878.1
Hypothetical protein; Pfam:pfam04234 CopC domain.
     
 0.496
AMS43936.1
Copper binding protein; Pfam:pfam04234 CopC domain.
     
 0.496
AMS41041.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.474
AMS43517.1
Pfam:pfam00106 short chain dehydrogenase.
       0.447
AMS40583.1
Hypothetical protein; Pfam:pfam00403 Heavy-metal-associated domain.
 
  
 0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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