STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43517.1Pfam:pfam00106 short chain dehydrogenase. (302 aa)    
Predicted Functional Partners:
AMS43518.1
Transcriptional regulator, repressor protein MphR(A).
 
     0.806
AMS39978.1
EcaC; Pfam:pfam14534 Domain of unknown function (DUF4440).
  
     0.614
AMS42016.1
Abortive infection protein.
  
     0.588
AMS43496.1
Oxidoreductase, short chain dehydrogenase/reductase family; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
 
  
 0.556
AMS40743.1
Pfam:pfam01636 Phosphotransferase enzyme family.
 
 
 0.524
AMS43726.1
Hypothetical protein; Pfam:pfam11706 CGNR zinc finger.
  
     0.497
AMS39926.1
Hypothetical protein.
  
     0.494
AMS39201.1
Hypothetical protein; Pfam:pfam04237 YjbR.
  
     0.483
AMS43907.1
Amino acid ABC transporter substrate-binding protein; Pfam:pfam01094 Receptor family ligand binding region.
  
 
   0.479
AMS38992.1
Hypothetical protein.
  
    0.460
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.