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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43518.1Transcriptional regulator, repressor protein MphR(A). (190 aa)    
Predicted Functional Partners:
AMS43517.1
Pfam:pfam00106 short chain dehydrogenase.
 
     0.806
AMS39360.1
Hypothetical protein.
  
     0.738
AMS42307.1
Nitrate ABC transporter substrate-binding protein; Pfam:pfam09084 NMT1/THI5 like.
  
     0.726
AMS41941.1
Hypothetical protein.
  
     0.648
AMS41779.1
Hypothetical protein; Pfam:pfam14415 Domain of unknown function (DUF4424).
  
     0.625
AMS41281.1
Membrane protein.
  
     0.613
AMS42655.1
Hypothetical protein.
  
     0.579
AMS39201.1
Hypothetical protein; Pfam:pfam04237 YjbR.
  
     0.550
AMS43215.1
Bifunctional deaminase-reductase domain protein; Pfam:pfam01872 RibD C-terminal domain.
  
     0.542
AMS41484.1
Hypothetical protein; Pfam:pfam08241 Methyltransferase domain.
  
 
   0.518
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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