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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43534.1Dehydrogenase; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)    
Predicted Functional Partners:
AMS43535.1
DNA-binding domain-containing protein, AraC-type; Pfam:pfam12852 Cupin.
 
     0.886
AMS39722.1
Hypothetical protein; Pfam:pfam01501 Glycosyl transferase family 8.
  
    0.519
minE
Hypothetical protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.459
AMS43633.1
Short-chain dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
 
  
 0.440
AMS40069.1
Short-chain dehydrogenase/reductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
 
  
 0.439
AMS41510.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
 
    0.439
AMS44197.1
Histidine kinase; Pfam:pfam12860 PAS fold.
  
  
 0.425
AMS42002.1
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
    0.420
AMS39276.1
Short-chain dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
 
  
 0.407
bamD
Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
    0.405
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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