| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMS42736.1 | AMS43539.1 | AA2016_3816 | AA2016_4629 | Zinc metalloprotease; Pfam:pfam02163 Peptidase family M50. | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | 0.759 |
| AMS42736.1 | secD | AA2016_3816 | AA2016_3352 | Zinc metalloprotease; Pfam:pfam02163 Peptidase family M50. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.587 |
| AMS42736.1 | secY | AA2016_3816 | AA2016_3524 | Zinc metalloprotease; Pfam:pfam02163 Peptidase family M50. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.405 |
| AMS42736.1 | yidC | AA2016_3816 | AA2016_5427 | Zinc metalloprotease; Pfam:pfam02163 Peptidase family M50. | Insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.443 |
| AMS43539.1 | AMS42736.1 | AA2016_4629 | AA2016_3816 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Zinc metalloprotease; Pfam:pfam02163 Peptidase family M50. | 0.759 |
| AMS43539.1 | bamD | AA2016_4629 | AA2016_2816 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.709 |
| AMS43539.1 | era | AA2016_4629 | AA2016_4627 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.845 |
| AMS43539.1 | lepA | AA2016_4629 | AA2016_0052 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.777 |
| AMS43539.1 | minE | AA2016_4629 | AA2016_3186 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Hypothetical protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.670 |
| AMS43539.1 | rnc | AA2016_4629 | AA2016_4628 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.922 |
| AMS43539.1 | rnhB | AA2016_4629 | AA2016_4888 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.740 |
| AMS43539.1 | secD | AA2016_4629 | AA2016_3352 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.752 |
| AMS43539.1 | secY | AA2016_4629 | AA2016_3524 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.671 |
| AMS43539.1 | yidC | AA2016_4629 | AA2016_5427 | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | Insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.768 |
| bamD | AMS43539.1 | AA2016_2816 | AA2016_4629 | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | 0.709 |
| bamD | minE | AA2016_2816 | AA2016_3186 | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Hypothetical protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.515 |
| bamD | secD | AA2016_2816 | AA2016_3352 | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.440 |
| bamD | yidC | AA2016_2816 | AA2016_5427 | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.696 |
| era | AMS43539.1 | AA2016_4627 | AA2016_4629 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Pfam:pfam00717 Peptidase S24-like; Belongs to the peptidase S26 family. | 0.845 |
| era | lepA | AA2016_4627 | AA2016_0052 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.735 |