STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43550.1Pfam:pfam01464 Transglycosylase SLT domain. (680 aa)    
Predicted Functional Partners:
fliE
Hypothetical protein; Pfam:pfam02049 Flagellar hook-basal body complex protein FliE.
 
  
 0.577
AMS43551.1
Pfam:pfam12697 Alpha/beta hydrolase family.
  
    0.560
AMS41040.1
Pfam:pfam01052 Surface presentation of antigens (SPOA).
 
  
 0.547
AMS42961.1
SmpA/OmlA domain-containing protein; Pfam:pfam04355 SmpA / OmlA family.
  
   
 0.512
dapA-2
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.504
AMS41036.1
Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain.
  
  
 0.503
AMS40673.1
Cell division protein FtsX.
 
     0.499
AMS41034.1
Hypothetical protein.
 
  
 0.479
AMS41012.1
Pfam:pfam07559 Flagellar basal body protein FlaE.
  
  
 0.447
AMS41015.1
Hypothetical protein; Pfam:pfam02120 Flagellar hook-length control protein FliK.
 
    0.441
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.