STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43554.1Integrase; Pfam:pfam00589 Phage integrase family. (300 aa)    
Predicted Functional Partners:
xerC
Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
   
 0.746
AMS41373.1
Hypothetical protein.
  
     0.658
AMS41818.1
Endonuclease.
  
     0.656
AMS43555.1
Pfam:pfam00155 Aminotransferase class I and II.
 
     0.518
AMS44199.1
Hypothetical protein.
  
     0.511
AMS40377.1
Hypothetical protein.
  
    0.508
AMS40725.1
Amidophosphoribosyltransferase; Pfam:pfam00156 Phosphoribosyl transferase domain.
  
    0.492
AMS42987.1
Hypothetical protein.
  
     0.475
AMS43808.1
Polysaccharide deacetylase.
  
     0.462
AMS40667.1
Pfam:pfam02153 Prephenate dehydrogenase.
  
    0.461
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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