Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43558.1Pfam:pfam00529 HlyD family secretion protein. (475 aa)    
Predicted Functional Partners:
AMS43557.1
Type I secretion system ATPase; Pfam:pfam00005 ABC transporter.
 
  
 0.959
AMS41082.1
Putative Type I secretion system ATPase, PrtD; Pfam:pfam00005 ABC transporter.
 
  
 0.814
AMS42247.1
Transporter; Pfam:pfam02321 Outer membrane efflux protein.
 
 
 0.771
AMS39134.1
ABC-type bacteriocin/lantibiotic exporter; Pfam:pfam00005 ABC transporter.
 
 
 0.709
AMS41821.1
Multidrug ABC transporter substrate-binding protein; Pfam:pfam12704 MacB-like periplasmic core domain.
  
  
 0.563
AMS44151.1
ABC transporter permease protein; Pfam:pfam12704 MacB-like periplasmic core domain.
  
  
 0.563
AMS43560.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
  
    0.557
AMS43556.1
Hypothetical protein; Pfam:pfam00188 Cysteine-rich secretory protein family.
       0.548
AMS43559.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
     
 0.544
AMS39066.1
Hypothetical protein; Pfam:pfam13650 Aspartyl protease.
  
     0.432
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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