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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43611.1Cysteine desufuration protein SufE; Pfam:pfam02657 Fe-S metabolizm associated domain. (142 aa)    
Predicted Functional Partners:
AMS42857.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.990
AMS42861.1
Cysteine desulfarase; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
 
 
 0.872
AMS42859.1
Transporter; Pfam:pfam00005 ABC transporter.
 
 
 0.852
AMS42858.1
ABC transporter ATP-binding protein; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
 
 
 0.841
AMS39802.1
Pfam:pfam00266 Aminotransferase class-V.
  
 
 0.799
AMS43610.1
Hypothetical protein.
       0.517
AMS42856.1
FeS assembly SUF system protein; Pfam:pfam01883 Domain of unknown function DUF59.
 
     0.463
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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